PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo11G0036800
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family bHLH
Protein Properties Length: 296aa    MW: 31917.4 Da    PI: 9.1589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo11G0036800genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.26.9e-0983133154
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +r  h ++Er+RR  +N  f+ L +llP++     ++ + a+i+  ++++Ik +
  Spipo11G0036800  83 QRIRHIAAERNRRMMMNLHFSSLCSLLPPS---FLQRGDQASIVGGTIDFIKVM 133
                      6889*************************9...89****************965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.90E-980138No hitNo description
SuperFamilySSF474596.15E-1381151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-981138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.61482133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-683133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-488139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd021160.00168223279No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MGMRKECRGI ANRRTSPSSV THGAEPMSTM DHRCGRQIQS SCRDGEPRRA APATNTAVNA  60
SPAIWGGAKC GEKRKRSAGK DKQRIRHIAA ERNRRMMMNL HFSSLCSLLP PSFLQRGDQA  120
SIVGGTIDFI KVMEQLLQTL LAEKRTRSGG VTTTLSPLTV AAQYLYAYCS SNQNTTFASA  180
PPSTAAPREE EAGDDKFEGG NGGADPTTVA NVEATVVQTQ VNIRVLSRRR PGQLLRVTVA  240
LEKLRLSVLH LSVTSLADAV VYSLILKMEE DCELTSAEEI AAVVHEIFST IATCG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010251348.18e-56PREDICTED: transcription factor bHLH67-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79573344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01460.13e-41bHLH family protein